2016 Ford Explorer · transmission
2016 Ford Explorer Transmission Replacement Cost

The 2016 Explorer 3.5L runs the 6F50 six-speed (EcoBoost uses the 6F55) — a transverse six-speed whose harsh shifts are the pattern to know. Replacement cost, symptoms, and options.
Shop 2016 Ford Explorer replacement parts
Used 2016 Ford Explorer Transmission
Fits 2016 Ford Explorer
Inspected, lower-cost option from our inventory.
$474–$549
Shop used transmissionRemanufactured 2016 Ford Explorer Transmission
Fits 2016 Ford Explorer
Rebuilt to spec and warranty-backed for peace of mind.
$2,735–$2,960
Shop remanufactured transmissionPrice ranges are typical replacement costs; final pricing and availability are confirmed in our catalog.
A 2016 Ford Explorer transmission replacement usually means a used 6F50 — used units run about $474–$549 for the part itself, and remanufactured units run about $2,735–$2,960. The 6F50 is a proven transverse six-speed; harsh shifts are the symptom that decides the repair.
The Transmission in Your 2016 Ford Explorer
The 2016
Explorer 3.5L pairs with the 6F50 six-speed transaxle; the 3.5L EcoBoost uses the stronger 6F55, and the 2.0L four uses the 6F35. All three are six-speed transverse automatics, but they are not interchangeable — the 6F55 is built for the EcoBoost's higher torque, and the bellhousings and calibrations differ. Confirm the engine (2.0L, 3.5L, or 3.5L EcoBoost) from the VIN before ordering, and use only Mercon LV fluid — the wrong fluid causes slippage and damage in these units.
Common Transmission Problems
Harsh shifts, especially cold Rough or clunky shifts — particularly on cold starts or in high-mileage units — are the most-reported 6F50 complaint. Valve-body wear and tired solenoids are the usual cause, and the problem is often worse before the transmission reaches operating temperature.
Hesitation and delayed engagement A delay engaging Drive or Reverse, or hesitation when accelerating from a stop, usually means low or degraded fluid, a worn valve body, or clutch wear. Check the fluid level and condition first — dark, burnt fluid means internal wear.
Slipping under load If the engine revs climb without matching acceleration, the clutches are slipping. Slipping that worsens as the unit warms up is internal wear, not an adjustment — plan on replacement rather than another service.
How Much Does It Cost?
For the part itself, a used 6F50 for the 2016
Explorer runs about $474–$549, and a remanufactured unit runs about $2,735–$2,960. Pricing moves with engine (6F50 versus 6F55), mileage, and availability. Add installation labor, freight, and a refundable core charge on remanufactured units. A remanufactured unit costs more but arrives with the stronger warranty: up to 60 months with unlimited miles, parts and labor, versus up to 1 year or 12,000 miles parts-only on a used unit. See the live stocked units for this Explorer at eptransmissions.com/transmissions/ford/ford-explorer/2016.
Used vs. Remanufactured — Which Is Right for You?
A used 6F50 is the lower-cost path and a first-class option here: a pull from a donor vehicle, inspected and documented with mileage, that gets a solid vehicle running again without a large outlay. It carries up to 1 year or 12,000 miles of parts-only coverage. A remanufactured 6F50 is fully disassembled, inspected, and rebuilt to specification with new wear components and tested before it ships. It costs more, but it arrives with the stronger warranty — up to 60 months with unlimited miles, parts and labor — and it is the smarter long-term choice if you plan to keep the vehicle for years. Either way, confirm the VIN, the transmission code, and 2WD versus 4WD before you order, and have a licensed shop do the install. See the live stocked units for this 2016 Ford Explorer at eptransmissions.com/transmissions/ford/ford-explorer/2016.
Our Warranty
We back every transmission we sell, and the two warranties are different in a way that matters when you choose. A remanufactured transmission carries up to 60 months of coverage with unlimited miles, parts and labor included, nationwide and transferable, with labor reimbursed per the Mitchell labor guide after an approved claim. A used transmission carries up to 1 year or 12,000 miles, parts only, with no labor reimbursement. Both require installation by a Licensed Automotive Repair Facility. Remanufactured units also carry a refundable core charge, returned when your old transmission comes back to us.
Is Replacement the Right Move?
Replacement is the right move when the failure is internal and the rest of the vehicle is worth saving — solid body and frame, good tires, no major suspension or electrical issues. A quality used or remanufactured transmission can extend the life of an otherwise good vehicle by years at a fraction of the cost of a replacement vehicle. Get an honest assessment first: if the vehicle also needs major work elsewhere, or the repair cost approaches the vehicle's value, the math changes. Proper diagnosis from a trusted mechanic is the essential first step — don't replace what doesn't need replacing, but don't pour repair money into a transmission that is already mechanically compromised.
Ready to Get Back on the Road?
Don't let a failed transmission sideline a 2016
Ford Explorer that still has life left. See the live stocked units for this vehicle at eptransmissions.com/transmissions/ford/ford-explorer/2016 — every unit listed there is in stock now, with fitment checked against your vehicle. Our drivetrain specialists confirm VIN fitment before you buy, and we want to get you back on the road.
Frequently Asked Questions
How much does it cost to replace the 2016 Ford Explorer transmission?
At eptransmissions.com, a used 6F50 for the 2016 Explorer runs about $474–$549 for the part itself, and a remanufactured unit runs about $2,735–$2,960. See live stocked units at eptransmissions.com/transmissions/ford/ford-explorer/2016.
Should I buy a used or remanufactured transmission for my 2016 Explorer?
A used 6F50 is the lower-cost option and a first-class choice when the rest of your Explorer is in good shape. A remanufactured unit is rebuilt to spec with stronger warranty coverage and is the smarter long-term choice if you plan to keep the SUV for years.
What transmission is in the 2016 Ford Explorer 3.5L?
The 6F50 six-speed automatic. The 3.5L EcoBoost uses the stronger 6F55 and the 2.0L four uses the 6F35 — confirm the engine from the VIN before ordering, because the three do not interchange.
Does eptransmissions.com warranty 2016 Explorer transmissions?
Yes. We back used transmissions up to 1 year or 12,000 miles, parts only, and remanufactured transmissions up to 60 months with unlimited miles, parts and labor. Installation by a Licensed Automotive Repair Facility is required, and our drivetrain specialists confirm VIN fitment before you buy.
Related on Expedia Parts
- Warranty policy and Expedia Protection: /warranty
- Transmission slip and shudder after replacement: /blog/transmission-slip-and-shudder-after-replacement
- Valve body issue or software issue: /blog/valve-body-issue-or-software-issue
- Used and reman transmissions: /used-transmissions
- Core return process: /core-return
- Shipping and freight delivery: /help-center/he-05130-what-are-the-different-shipping-options-costs-and-transit-times